varcodetools
R package and toolkit for analysis of DBL⍺ varcoding amplicon sequencing data (in development)
SIMPLEGEN
R package for simulating Plasmodium epidemiological and genetic data (in development)
PGEforge
Community resources for malaria genomic epidemiology analysis tools and analysis workflows.
Malaria Molecular Surveillance Study Design (MMS-SD)
These open-source materials provide training in study design and sample size calculation for researchers and practitioners working in malaria molecular surveillance.
epireview
R package that compiles epidemiological parameters from systematic reviews of the WHO priority pathogens with pandemic potential
DRpower pfhrp2/3 planner
This R package and decision-support tool can be used to design surveillance studies for malaria parasite diagnostic resistance monitoring. It is integrated in WHO malaria policy.
covidClassifyR
Easy-to-use web application that streamlines the data processing of Luminex-based SARS-CoV-2 serological data to classify recent exposure to COVID-19 using a machine learning algorithm
COVID-19 VaccinationScore
Tool to support initial COVID-19 vaccine roll‐out in Ecuador using a prioriization algorithm